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Hakeem Almabrazi
Senior Bioinformatic Programmer
Professional Background
Hakeem Almabrazi is a distinguished professional with over twenty years of experience in the fields of bioinformatics, computer science, and data science. His extensive expertise in genomics and genetics, particularly utilizing next-generation sequencing (NGS) data such as DNA-Seq, RNA-Seq, and Exome-Seq, marks him as a notable figure in the scientific community. Throughout his career, Hakeem has effectively designed, developed, and deployed numerous robust workflows and pipelines aimed at processing and analyzing complex genomics data.
He has a profound background in developing frameworks for managing NGS data, showcasing his ability to innovate and streamline processes crucial for efficient data handling. Hakeem has crafted fully functional workflows for Whole Genome Sequencing (WGS), RNA-Seq, and Whole Exome Sequencing (WES) data, demonstrating his capacity to tackle a wide array of sequencing needs. His skills extend to the discovery of single nucleotide polymorphisms (SNPs), insertions and deletions (Indels), and structural variants, as well as copy number variants, which are vital for understanding genetic variation in populations.
In addition to his hands-on experience, Hakeem is adept in performing Genome-Wide Association Studies (GWAS) and analyses related to complex genetic populations and Mendelian disorders. His good experience in executing challenging research projects further emphasizes his analytical capabilities and his contributions to advancing the field of genomics. Hakeem utilizes a diverse range of open-source bioinformatics tools and packages, as well as retrieving data from esteemed public databases, facilitating comprehensive data analysis and experimental design throughout his projects.
Hakeem has successfully designed and developed bioinformatics analytic tools specifically tailored to enhance manufacturing capabilities to meet the oligonucleotide and genetic material requirements of customers. His commitment to delivering high-quality products and services spans across offerings such as oligonucleotides, synthetic genes, sequencing primers, PCR assays, and amplification capture probes, all essential for various research and clinical applications.
Education and Achievements
Hakeem Almabrazi holds a Master’s degree in Computer Software Engineering from the University of Iowa, where he gained critical knowledge and skills to merge software development with computational biology. Alongside this, he also completed a Bachelor’s degree in Electrical Engineering at Iowa State University, laying a solid foundation for his understanding of the technical underpinnings of engineering and technology.
His academic pursuits, coupled with his extensive hands-on experience, have equipped him to make significant contributions to the scientific and technological landscape.
Professional Experience
In terms of professional experience, Hakeem currently holds the position of Senior Bioinformatician at G42, where he continues to leverage his rich skill set. Prior to this, he served as a Senior Software Architect at Sidra Medical and Research Center, where he played a pivotal role in developing software solutions tailored to meet the unique needs of the medical research landscape.
Before that, Hakeem worked as a Research Scientist at Integrated DNA Technologies, allowing him to expand his knowledge in DNA-related technologies and their applications. Additionally, he has experience in application development and support at The University of Iowa, further enriching his background in software development and support.
Skills and Expertise
Hakeem's technical skills include a strong understanding of machine learning and big data technologies, including methodologies and frameworks such as Hadoop and Hail, and their applications in computational biology. His broad experience in dealing with diverse user groups ensures that he can effectively communicate complex information to both technical and non-technical stakeholders.
Hakeem is proficient throughout the software development lifecycle, including requirements collection, design, coding, testing, and deployment, enabling him to lead development teams effectively in delivering robust software solutions. He continuously strives to stay abreast of new technologies, applying intensive research to solve sophisticated scientific problems.
His admirable organizational and communication skills further enhance his capability to lead projects and teams successfully.
Hakeem Almabrazi is, without a doubt, an asset in the fields of bioinformatics and data science, combining deep technical knowledge with a profound understanding of genetic research and applications. His extensive background and continuous efforts to evolve with emerging technologies emphasize his commitment to advancing scientific research and innovation.
